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Cells2Stats Release Notes

v1.1.0​

February 13, 2025

Improvements​

  • Added target count per area metric to the run statistics file content.
  • Added the --verbose-transfer command, which prints file names to the terminal when logs are copied

v1.0.0​

December 4, 2024

This is the initial release of Cells2Stats. Cells2Stats processes Teton™ Cytoprofiling data to generate detailed statistics and outputs that enable downstream analysis, including visualization using the CytoCanvas tool. 

New Features​

  • Performs target to cell assignment (including RNA and protein targets) and generation of associated raw and normalized metrics files
  • Performs morphology feature extraction from projection images with CellProfiler
  • Prepares run outputs for visualization in CytoCanvas
  • Optional arguments allow customization of processing, such as specifying batches, wells, whether to generate morphology features with CellProfiler, whether to generate files for CytoCanvas, and more.
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