Run Planning for Cytoprofiling

Planned runs let team members create and manage runs in ElemBio Cloud for use on any connected AVITI System. A team member can plan the run in ElemBio Cloud, then select it during run setup. The Planned Runs table displays saved configuration information for planned runs. You can only edit or delete planned runs through ElemBio Cloud.

Run Progression

After an instrument starts processing a planned run, the following rules apply:

• During run setup and before priming begins, the status of a planned run appears as In Use.
• If you discard a planned run before priming, the In Use status is removed and the run becomes available again for selection on instrument.
• After priming, the run moves from the Planned Runs table to the Active Runs and All Runs pages.
• If you discard the run or the run fails after priming, you cannot make it available again as a planned run. Instead, you must recreate the planned run.

Compatibility

Cytoprofiling planned runs only appear in AVITI OS if they are compatible with the AVITI System. When you add or edit a planned run, a statement at the bottom of the form identifies the run compatibility requirements.

Cytoprofiling planned runs are only compatible with AVITI24 Systems.

Add a Planned Run

1. On the Planned Runs page, select Plan a Run.
2. Select Cytoprofiling with Teton.
3. Enter a unique name for the run.
4. If you have prepared a run manifest, upload the CSV file.
5. Enter an optional description that represents the run.
6. In the Cytoprofiling Kit drop-down menu, select the kit.
7. Select the Well Layout.
8. Select Save Run.

   ElemBio Cloud saves the run, which appears in the Cytoprofiling Planned Runs table.

Run Manifest Validation

When you add or edit a planned run, ElemBio Cloud validates any attached run manifest. Validation ensures the run manifest is compatible with the planned run setup. If the run manifest contains mistakes or invalid data, ElemBio Cloud displays a list of errors and warnings.

You can save a planned run with warnings, but not errors. Before proceeding, resolve the errors and reupload the run manifest. For help setting up a cytoprofiling run manifest, see the Run Manifest Documentation.

Edit a Planned Run

1. On the Planned Runs page, locate the run you want to edit.
2. Select the Run Name, or in the Actions column, select More, and then select Edit.
3. Update the run information as needed.
4. Select Save Run.

Delete a Planned Run

1. On the Planned Runs page, locate the run you want to delete.
2. In the Actions column, select More, and then select Delete.
3. When prompted, enter the name of the planned run.
4. Select Delete to immediately remove the run.