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Related resources

Find product docs that sit next to Agent Hub: Cells2Stats, Catalyst™, ElemBio Cloud, and the Developer Hub.

Use these pages with Agent Hub. They are the product references for data, analysis, and programmatic access.

Analysis and data​

  • Cells2Stats — generate cell statistics and visualization files from cell screening runs.
  • Spatial Data Object — the standard Cells2Stats output for spatial analysis.
  • Workflow library — verified analysis workflows in ElemBio Cloud, including the Cells2Stats workflow.

The multiomics Python package section covers the Spatial Data Object and the Python package for analysis (elembio-spatialdata-analysis). Multiomics skills call this package when your agent runs analysis. On your own compute, install the package in addition to the skills. In a sandbox, the package is pre-installed. See also Load an SDO.

ElemBio Cloud and Catalyst​

Multiomics workflow​

The multiomics workflow is the Nextflow workflow for analysis of Spatial Data Objects. Additional implementation details may be required.

Developer tools​

See also​